PlantRNA, a database for tRNAs of photosynthetic eukaryotes.
Identifieur interne : 002545 ( Main/Exploration ); précédent : 002544; suivant : 002546PlantRNA, a database for tRNAs of photosynthetic eukaryotes.
Auteurs : Valérie Cognat [France] ; Gaël Pawlak ; Anne-Marie Duchêne ; Magali Daujat ; Anaïs Gigant ; Thalia Salinas ; Morgane Michaud ; Bernard Gutmann ; Philippe Giegé ; Anthony Gobert ; Laurence Maréchal-DrouardSource :
- Nucleic acids research [ 1362-4962 ] ; 2013.
Descripteurs français
- KwdFr :
- ARN de transfert (composition chimique), ARN de transfert (génétique), ARN de transfert (métabolisme), ARN des plantes (composition chimique), ARN des plantes (génétique), ARN des plantes (métabolisme), Bases de données d'acides nucléiques (MeSH), Bryopsida (génétique), Chlorophyta (génétique), Cyanophora (génétique), Diatomées (génétique), Enzymes (génétique), Enzymes (métabolisme), Génome mitochondrial (MeSH), Génome plastidique (MeSH), Génome végétal (MeSH), Interface utilisateur (MeSH), Internet (MeSH), Magnoliopsida (génétique), Phaeophyta (génétique), Photosynthèse (génétique), Plantes (génétique), Straménopiles (génétique).
- MESH :
- composition chimique : ARN de transfert, ARN des plantes.
- génétique : ARN de transfert, ARN des plantes, Bryopsida, Chlorophyta, Cyanophora, Diatomées, Enzymes, Magnoliopsida, Phaeophyta, Photosynthèse, Plantes, Straménopiles.
- métabolisme : ARN de transfert, ARN des plantes, Enzymes.
- Bases de données d'acides nucléiques, Génome mitochondrial, Génome plastidique, Génome végétal, Interface utilisateur, Internet.
English descriptors
- KwdEn :
- Bryopsida (genetics), Chlorophyta (genetics), Cyanophora (genetics), Databases, Nucleic Acid (MeSH), Diatoms (genetics), Enzymes (genetics), Enzymes (metabolism), Genome, Mitochondrial (MeSH), Genome, Plant (MeSH), Genome, Plastid (MeSH), Internet (MeSH), Magnoliopsida (genetics), Phaeophyta (genetics), Photosynthesis (genetics), Plants (genetics), RNA, Plant (chemistry), RNA, Plant (genetics), RNA, Plant (metabolism), RNA, Transfer (chemistry), RNA, Transfer (genetics), RNA, Transfer (metabolism), Stramenopiles (genetics), User-Computer Interface (MeSH).
- MESH :
- chemical , chemistry : RNA, Plant, RNA, Transfer.
- chemical , genetics : Enzymes, RNA, Plant, RNA, Transfer.
- genetics : Bryopsida, Chlorophyta, Cyanophora, Diatoms, Magnoliopsida, Phaeophyta, Photosynthesis, Plants, Stramenopiles.
- chemical , metabolism : Enzymes, RNA, Plant, RNA, Transfer.
- Databases, Nucleic Acid, Genome, Mitochondrial, Genome, Plant, Genome, Plastid, Internet, User-Computer Interface.
Abstract
PlantRNA database (http://plantrna.ibmp.cnrs.fr/) compiles transfer RNA (tRNA) gene sequences retrieved from fully annotated plant nuclear, plastidial and mitochondrial genomes. The set of annotated tRNA gene sequences has been manually curated for maximum quality and confidence. The novelty of this database resides in the inclusion of biological information relevant to the function of all the tRNAs entered in the library. This includes 5'- and 3'-flanking sequences, A and B box sequences, region of transcription initiation and poly(T) transcription termination stretches, tRNA intron sequences, aminoacyl-tRNA synthetases and enzymes responsible for tRNA maturation and modification. Finally, data on mitochondrial import of nuclear-encoded tRNAs as well as the bibliome for the respective tRNAs and tRNA-binding proteins are also included. The current annotation concerns complete genomes from 11 organisms: five flowering plants (Arabidopsis thaliana, Oryza sativa, Populus trichocarpa, Medicago truncatula and Brachypodium distachyon), a moss (Physcomitrella patens), two green algae (Chlamydomonas reinhardtii and Ostreococcus tauri), one glaucophyte (Cyanophora paradoxa), one brown alga (Ectocarpus siliculosus) and a pennate diatom (Phaeodactylum tricornutum). The database will be regularly updated and implemented with new plant genome annotations so as to provide extensive information on tRNA biology to the research community.
DOI: 10.1093/nar/gks935
PubMed: 23066098
PubMed Central: PMC3531208
Affiliations:
Links toward previous steps (curation, corpus...)
Le document en format XML
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(genetics)</term><term>Enzymes (metabolism)</term><term>Genome, Mitochondrial (MeSH)</term><term>Genome, Plant (MeSH)</term><term>Genome, Plastid (MeSH)</term><term>Internet (MeSH)</term><term>Magnoliopsida (genetics)</term><term>Phaeophyta (genetics)</term><term>Photosynthesis (genetics)</term><term>Plants (genetics)</term><term>RNA, Plant (chemistry)</term><term>RNA, Plant (genetics)</term><term>RNA, Plant (metabolism)</term><term>RNA, Transfer (chemistry)</term><term>RNA, Transfer (genetics)</term><term>RNA, Transfer (metabolism)</term><term>Stramenopiles (genetics)</term><term>User-Computer Interface (MeSH)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>ARN de transfert (composition chimique)</term><term>ARN de transfert (génétique)</term><term>ARN de transfert (métabolisme)</term><term>ARN des plantes (composition chimique)</term><term>ARN des plantes (génétique)</term><term>ARN des plantes (métabolisme)</term><term>Bases de données d'acides nucléiques 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xml:lang="en"><term>Databases, Nucleic Acid</term><term>Genome, Mitochondrial</term><term>Genome, Plant</term><term>Genome, Plastid</term><term>Internet</term><term>User-Computer Interface</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Bases de données d'acides nucléiques</term><term>Génome mitochondrial</term><term>Génome plastidique</term><term>Génome végétal</term><term>Interface utilisateur</term><term>Internet</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">PlantRNA database (http://plantrna.ibmp.cnrs.fr/) compiles transfer RNA (tRNA) gene sequences retrieved from fully annotated plant nuclear, plastidial and mitochondrial genomes. The set of annotated tRNA gene sequences has been manually curated for maximum quality and confidence. The novelty of this database resides in the inclusion of biological information relevant to the function of all the tRNAs entered in the library. This includes 5'- and 3'-flanking sequences, A and B box sequences, region of transcription initiation and poly(T) transcription termination stretches, tRNA intron sequences, aminoacyl-tRNA synthetases and enzymes responsible for tRNA maturation and modification. Finally, data on mitochondrial import of nuclear-encoded tRNAs as well as the bibliome for the respective tRNAs and tRNA-binding proteins are also included. The current annotation concerns complete genomes from 11 organisms: five flowering plants (Arabidopsis thaliana, Oryza sativa, Populus trichocarpa, Medicago truncatula and Brachypodium distachyon), a moss (Physcomitrella patens), two green algae (Chlamydomonas reinhardtii and Ostreococcus tauri), one glaucophyte (Cyanophora paradoxa), one brown alga (Ectocarpus siliculosus) and a pennate diatom (Phaeodactylum tricornutum). The database will be regularly updated and implemented with new plant genome annotations so as to provide extensive information on tRNA biology to the research community.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">23066098</PMID><DateCompleted><Year>2013</Year><Month>05</Month><Day>13</Day></DateCompleted><DateRevised><Year>2018</Year><Month>11</Month><Day>13</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1362-4962</ISSN><JournalIssue CitedMedium="Internet"><Volume>41</Volume><Issue>Database issue</Issue><PubDate><Year>2013</Year><Month>Jan</Month></PubDate></JournalIssue><Title>Nucleic acids research</Title><ISOAbbreviation>Nucleic Acids Res</ISOAbbreviation></Journal><ArticleTitle>PlantRNA, a database for tRNAs of photosynthetic eukaryotes.</ArticleTitle><Pagination><MedlinePgn>D273-9</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1093/nar/gks935</ELocationID><Abstract><AbstractText>PlantRNA database (http://plantrna.ibmp.cnrs.fr/) compiles transfer RNA (tRNA) gene sequences retrieved from fully annotated plant nuclear, plastidial and mitochondrial genomes. The set of annotated tRNA gene sequences has been manually curated for maximum quality and confidence. The novelty of this database resides in the inclusion of biological information relevant to the function of all the tRNAs entered in the library. This includes 5'- and 3'-flanking sequences, A and B box sequences, region of transcription initiation and poly(T) transcription termination stretches, tRNA intron sequences, aminoacyl-tRNA synthetases and enzymes responsible for tRNA maturation and modification. Finally, data on mitochondrial import of nuclear-encoded tRNAs as well as the bibliome for the respective tRNAs and tRNA-binding proteins are also included. The current annotation concerns complete genomes from 11 organisms: five flowering plants (Arabidopsis thaliana, Oryza sativa, Populus trichocarpa, Medicago truncatula and Brachypodium distachyon), a moss (Physcomitrella patens), two green algae (Chlamydomonas reinhardtii and Ostreococcus tauri), one glaucophyte (Cyanophora paradoxa), one brown alga (Ectocarpus siliculosus) and a pennate diatom (Phaeodactylum tricornutum). The database will be regularly updated and implemented with new plant genome annotations so as to provide extensive information on tRNA biology to the research community.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Cognat</LastName><ForeName>Valérie</ForeName><Initials>V</Initials><AffiliationInfo><Affiliation>Institut de Biologie Moléculaire des Plantes, UPR 2357-CNRS, Université de Strasbourg, 12 rue du Général Zimmer, F-67084 Strasbourg Cedex, France.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Pawlak</LastName><ForeName>Gaël</ForeName><Initials>G</Initials></Author><Author ValidYN="Y"><LastName>Duchêne</LastName><ForeName>Anne-Marie</ForeName><Initials>AM</Initials></Author><Author ValidYN="Y"><LastName>Daujat</LastName><ForeName>Magali</ForeName><Initials>M</Initials></Author><Author ValidYN="Y"><LastName>Gigant</LastName><ForeName>Anaïs</ForeName><Initials>A</Initials></Author><Author ValidYN="Y"><LastName>Salinas</LastName><ForeName>Thalia</ForeName><Initials>T</Initials></Author><Author ValidYN="Y"><LastName>Michaud</LastName><ForeName>Morgane</ForeName><Initials>M</Initials></Author><Author ValidYN="Y"><LastName>Gutmann</LastName><ForeName>Bernard</ForeName><Initials>B</Initials></Author><Author ValidYN="Y"><LastName>Giegé</LastName><ForeName>Philippe</ForeName><Initials>P</Initials></Author><Author ValidYN="Y"><LastName>Gobert</LastName><ForeName>Anthony</ForeName><Initials>A</Initials></Author><Author ValidYN="Y"><LastName>Maréchal-Drouard</LastName><ForeName>Laurence</ForeName><Initials>L</Initials></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2012</Year><Month>10</Month><Day>12</Day></ArticleDate></Article><MedlineJournalInfo><Country>England</Country><MedlineTA>Nucleic Acids Res</MedlineTA><NlmUniqueID>0411011</NlmUniqueID><ISSNLinking>0305-1048</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D004798">Enzymes</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D018749">RNA, Plant</NameOfSubstance></Chemical><Chemical><RegistryNumber>9014-25-9</RegistryNumber><NameOfSubstance UI="D012343">RNA, Transfer</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D019068" MajorTopicYN="N">Bryopsida</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D000460" MajorTopicYN="N">Chlorophyta</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D044424" MajorTopicYN="N">Cyanophora</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D030561" MajorTopicYN="Y">Databases, Nucleic Acid</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D017377" MajorTopicYN="N">Diatoms</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D004798" MajorTopicYN="N">Enzymes</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D054629" MajorTopicYN="N">Genome, Mitochondrial</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D018745" MajorTopicYN="N">Genome, Plant</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D054627" MajorTopicYN="N">Genome, Plastid</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D020407" MajorTopicYN="N">Internet</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D019684" MajorTopicYN="N">Magnoliopsida</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D000459" MajorTopicYN="N">Phaeophyta</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D010788" MajorTopicYN="N">Photosynthesis</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D010944" MajorTopicYN="N">Plants</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D018749" MajorTopicYN="N">RNA, Plant</DescriptorName><QualifierName UI="Q000737" 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IdType="pubmed">16251277</ArticleId></ArticleIdList></Reference><Reference><Citation>Nat Protoc. 2007;2(4):953-71</Citation><ArticleIdList><ArticleId IdType="pubmed">17446895</ArticleId></ArticleIdList></Reference><Reference><Citation>Cell. 2007 Apr 20;129(2):229-34</Citation><ArticleIdList><ArticleId IdType="pubmed">17448980</ArticleId></ArticleIdList></Reference><Reference><Citation>Nature. 2007 Sep 27;449(7161):463-7</Citation><ArticleIdList><ArticleId IdType="pubmed">17721507</ArticleId></ArticleIdList></Reference><Reference><Citation>Annu Rev Genet. 2007;41:147-68</Citation><ArticleIdList><ArticleId IdType="pubmed">17600460</ArticleId></ArticleIdList></Reference><Reference><Citation>Genome Biol. 2007;8(9):R198</Citation><ArticleIdList><ArticleId IdType="pubmed">17880704</ArticleId></ArticleIdList></Reference><Reference><Citation>Cell. 2008 Apr 4;133(1):78-89</Citation><ArticleIdList><ArticleId IdType="pubmed">18394991</ArticleId></ArticleIdList></Reference><Reference><Citation>Genetics. 2008 May;179(1):113-23</Citation><ArticleIdList><ArticleId IdType="pubmed">18493044</ArticleId></ArticleIdList></Reference><Reference><Citation>Trends Biochem Sci. 2008 Jul;33(7):320-9</Citation><ArticleIdList><ArticleId IdType="pubmed">18513973</ArticleId></ArticleIdList></Reference><Reference><Citation>Nucleic Acids Res. 2009 Jan;37(Database issue):D159-62</Citation><ArticleIdList><ArticleId IdType="pubmed">18957446</ArticleId></ArticleIdList></Reference><Reference><Citation>Nucleic Acids Res. 2009 Jan;37(Database issue):D93-7</Citation><ArticleIdList><ArticleId IdType="pubmed">18984615</ArticleId></ArticleIdList></Reference><Reference><Citation>Curr Genet. 2009 Feb;55(1):1-18</Citation><ArticleIdList><ArticleId IdType="pubmed">19083240</ArticleId></ArticleIdList></Reference><Reference><Citation>FEBS Lett. 2010 Jan 21;584(2):387-95</Citation><ArticleIdList><ArticleId IdType="pubmed">19903480</ArticleId></ArticleIdList></Reference><Reference><Citation>Adv Exp Med Biol. 2011;722:137-55</Citation><ArticleIdList><ArticleId IdType="pubmed">21915787</ArticleId></ArticleIdList></Reference><Reference><Citation>Trends Genet. 2011 Oct;27(10):422-32</Citation><ArticleIdList><ArticleId IdType="pubmed">21741109</ArticleId></ArticleIdList></Reference><Reference><Citation>Proc Natl Acad Sci U S A. 2011 Oct 4;108(40):E794-802</Citation><ArticleIdList><ArticleId IdType="pubmed">21896722</ArticleId></ArticleIdList></Reference><Reference><Citation>Nucleic Acids Res. 2012 Jan;40(Database issue):D1178-86</Citation><ArticleIdList><ArticleId IdType="pubmed">22110026</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS One. 2012;7(2):e32138</Citation><ArticleIdList><ArticleId IdType="pubmed">22359664</ArticleId></ArticleIdList></Reference><Reference><Citation>Proc Natl Acad Sci U S A. 2012 Jul 24;109(30):12219-24</Citation><ArticleIdList><ArticleId IdType="pubmed">22778405</ArticleId></ArticleIdList></Reference><Reference><Citation>J Mol Biol. 2010 Feb 26;396(3):821-31</Citation><ArticleIdList><ArticleId IdType="pubmed">20026070</ArticleId></ArticleIdList></Reference><Reference><Citation>Nat Struct Mol Biol. 2010 Jun;17(6):740-4</Citation><ArticleIdList><ArticleId IdType="pubmed">20473316</ArticleId></ArticleIdList></Reference><Reference><Citation>Proc Natl Acad Sci U S A. 2010 Jun 15;107(24):10949-54</Citation><ArticleIdList><ArticleId IdType="pubmed">20534454</ArticleId></ArticleIdList></Reference><Reference><Citation>Genes Dev. 2010 Sep 1;24(17):1832-60</Citation><ArticleIdList><ArticleId IdType="pubmed">20810645</ArticleId></ArticleIdList></Reference><Reference><Citation>Nat Genet. 2010 Oct;42(10):833-9</Citation><ArticleIdList><ArticleId IdType="pubmed">20802477</ArticleId></ArticleIdList></Reference><Reference><Citation>BMC Plant Biol. 2010;10:201</Citation><ArticleIdList><ArticleId IdType="pubmed">20836892</ArticleId></ArticleIdList></Reference><Reference><Citation>Nucleic Acids Res. 2011 Jan;39(Database issue):D210-3</Citation><ArticleIdList><ArticleId IdType="pubmed">21071414</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant J. 2011 Apr;66(1):80-93</Citation><ArticleIdList><ArticleId IdType="pubmed">21443625</ArticleId></ArticleIdList></Reference><Reference><Citation>Nucleic Acids Res. 2011 Apr;39(8):3331-9</Citation><ArticleIdList><ArticleId IdType="pubmed">21138970</ArticleId></ArticleIdList></Reference><Reference><Citation>Nature. 2000 Dec 14;408(6814):796-815</Citation><ArticleIdList><ArticleId IdType="pubmed">11130711</ArticleId></ArticleIdList></Reference><Reference><Citation>Trends Cell Biol. 2000 Dec;10(12):509-13</Citation><ArticleIdList><ArticleId IdType="pubmed">11121736</ArticleId></ArticleIdList></Reference><Reference><Citation>Nature. 2011 Jul 14;475(7355):189-95</Citation><ArticleIdList><ArticleId IdType="pubmed">21743474</ArticleId></ArticleIdList></Reference><Reference><Citation>RNA. 2003 Aug;9(8):923-30</Citation><ArticleIdList><ArticleId IdType="pubmed">12869703</ArticleId></ArticleIdList></Reference><Reference><Citation>EMBO Rep. 2004 Jan;5(1):71-7</Citation><ArticleIdList><ArticleId IdType="pubmed">14710190</ArticleId></ArticleIdList></Reference><Reference><Citation>Genome Res. 2004 Jun;14(6):1188-90</Citation><ArticleIdList><ArticleId IdType="pubmed">15173120</ArticleId></ArticleIdList></Reference><Reference><Citation>Proteomics. 2004 Jun;4(6):1581-90</Citation><ArticleIdList><ArticleId IdType="pubmed">15174128</ArticleId></ArticleIdList></Reference><Reference><Citation>Nucleic Acids Res. 1988 Mar 25;16(5):1951-66</Citation><ArticleIdList><ArticleId IdType="pubmed">3357766</ArticleId></ArticleIdList></Reference><Reference><Citation>J Biol Chem. 1990 Jul 25;265(21):12139-42</Citation><ArticleIdList><ArticleId IdType="pubmed">2373682</ArticleId></ArticleIdList></Reference><Reference><Citation>Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W686-9</Citation><ArticleIdList><ArticleId IdType="pubmed">15980563</ArticleId></ArticleIdList></Reference></ReferenceList></PubmedData></pubmed><affiliations><list><country><li>France</li></country><region><li>Alsace (région administrative)</li><li>Grand Est</li></region><settlement><li>Strasbourg</li></settlement><orgName><li>Université de Strasbourg</li></orgName></list><tree><noCountry><name sortKey="Daujat, Magali" sort="Daujat, Magali" uniqKey="Daujat M" first="Magali" last="Daujat">Magali Daujat</name><name sortKey="Duchene, Anne Marie" sort="Duchene, Anne Marie" uniqKey="Duchene A" first="Anne-Marie" last="Duchêne">Anne-Marie Duchêne</name><name sortKey="Giege, Philippe" sort="Giege, Philippe" uniqKey="Giege P" first="Philippe" last="Giegé">Philippe Giegé</name><name sortKey="Gigant, Anais" sort="Gigant, Anais" uniqKey="Gigant A" first="Anaïs" 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